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154 publications found

AI based solution to optimize the fertilizer composition in hydroponics agriculture

Pubudu Ekanayake, Shantha Fernando, Ranga Rodrigo, Sanath Jayasena

Conference ICML Proceedings of the 2023 15th International Conference on Machine Learning and Computing , pp. 158-164 · 2023 · Cited by 4

Machine Learning and Pattern Recognition

Abstract

Precision agriculture is one of the trending research areas in the world. AI technologies have been applied to greenhouse hydroponics agriculture (which comes under precision agriculture) to control the requirements of the plants in greenhouse agriculture. Apart from the environmental conditions such as temperature, humidity, and light intensity, the optimum combination of the fertilizer components, EC, and pH value provided during the plants’ growth phase is vital to obtaining a higher yield during the harvesting period. However, finding the optimal fertilizer composition is challenging due to the fact that the required fertilizer composition is different for different plant types and the experimental cost is higher. Sparse data samples will be received in data-driven experiments because of the large search space (number of permutations) of the fertilizer combinations. This paper presents an experimental design and AI …

Resilient sparse array radar with the aid of deep learning

Aya Mostafa Ahmed, Sampath Perera, Aydin Sezgin, Fulvio Gini

Conference VTC 2023 IEEE 97th Vehicular Technology Conference (VTC2023-Spring) , pp. 1-5 · 2023 · Cited by 3

Machine Learning and Pattern RecognitionStatistical Signal Processing and EstimationArray and Radar Signal Processing

Abstract

In this paper, we address the problem of direction of arrival (DOA) estimation for multiple targets in the presence of sensor failures in a sparse array. Generally, sparse arrays are known with very high-resolution capabilities, where N physical sensors can resolve up to uncorrelated sources. However, among the many configurations introduced in the literature, the arrays that provide the largest hole-free co-array are the most susceptible to sensor failures. We propose here two machine learning (ML) methods to mitigate the effect of sensor failures and maintain the DOA estimation performance and resolution. The first method enhances the conventional spatial smoothing using deep neural network (DNN), while the second one is an end-to-end data-driven method. Numerical results show that both approaches can significantly improve the performance of MRA with two failed sensors. The data-driven method can …

End-to-end data-dependent routing in multi-path neural networks

Dumindu Tissera, Rukshan Darshana Wijesinghe, Kasun Vithanage, Alex Xavier, Shantha Fernando, Ranga Rodrigo

Journal Neural Computing and Applications , vol. 35(17) , pp. 12655-12674 · 2023 · Cited by 1

Machine Learning and Pattern Recognition

Abstract

Neural networks are known to give better performance with increased depth due to their ability to learn more abstract features. Although the deepening of networks has been well established, there is still room for efficient feature extraction within a layer, which would reduce the need for mere parameter increment. The conventional widening of networks by having more filters in each layer introduces a quadratic increment of parameters. Having multiple parallel convolutional/dense operations in each layer solves this problem, but without any context-dependent allocation of input among these operations: The parallel computations tend to learn similar features making the widening process less effective. Therefore, we propose the use of multi-path neural networks with data-dependent resource allocation from parallel computations within layers, which also lets an input be routed end-to-end through these parallel …

Towards fabricating visible wavelength d2nns through multi-level quantization for quantitative phase imaging (conference presentation)

Hasindu Kariyawasam, Ramith Hettiarachchi, Quansan Yang, Udith Haputhanthri, Kithmini Herath, Chamira U. S. Edussooriya, Edward Boyden, Peter So, Dushan N Wadduwage

Conference Quantitative Phase Imaging IX , pp. PC123890C · 2023 · Cited by 1

Machine Learning and Pattern RecognitionBiomedical Imaging and ReconstructionPhotonics and Optical Systems

Abstract

Since its introduction, diffractive deep neural networks (D2NN) have been an emerging technology with many useful applications, such as 3D object recognition, saliency segmentation, and quantitative phase microscopy. However, fabricating D2NNs operating in the visible range has not been performed due to the complexities of fabricating nano-scale elements. Recent advancements such as Implosion Fabrication have made it possible to fabricate such networks using a discrete number of phase weights. We propose a quantization-aware training approach for D2NNs through modeling the quantization process in a differentiable manner using a sigmoid-based quantization function, facilitating the fabrication process. We also propose an efficient training schedule to guide the optimization process to converge to a better minima despite the limited number of quantization levels. Our method is simulated and …

Lost in Translation: The Critical Role of Attention in Adaptive Image Reconstruction

LTN Wickremasinghe, DSPA Niwarthana, Pamuditha Somarathne, Arulmolivarman Thieshanthan, Brandon Weissbourd, Chamira U. S. Edussooriya, Dushan N Wadduwage

Conference Computational Optical Sensing and Imaging , pp. JM1B. 5 · 2023 · Cited by 0

Computer VisionMachine Learning and Pattern RecognitionBiomedical Imaging and Reconstruction

Abstract

We propose a novel attention-based deep learning framework for reconstructing images from compressively sensed measurements. Our method leverages knowledge of the sampling basis and structured sampling patterns, highlighting the importance of learning adaptive features from measurements.

Contrastive Deep Encoding Enables Uncertainty-aware Machine-learning-assisted Histopathology

Dushan N Wadduwage, Nirhoshan Sivaroopan, Chamuditha Jayanga, Chalani Ekanayake, Hasindri Watawana, Jathurshan Pradeepkumar, Mithunjha Anandakumar, Ranga Rodrigo, Chamira U. S. Edussooriya

Other · 2023 · Cited by 0

Machine Learning and Pattern RecognitionMedical Image Analysis

Abstract

Deep neural network models can learn clinically relevant features from millions of histopathology images. However generating high-quality annotations to train such models for each hospital, each cancer type, and each diagnostic task is prohibitively laborious. On the other hand, terabytes of training data–while lacking reliable annotations–are readily available in the public domain in some cases. In this work, we explore how these large datasets can be consciously utilized to pre-train deep networks to encode informative representations. We then fine-tune our pre-trained models on a fraction of annotated training data to perform specific downstream tasks. We show that our approach can reach the current state-of-the-art (SOTA) for patch-level classification with only 1-10% randomly selected annotations compared to other SOTA approaches. Moreover, we propose an uncertainty-aware loss function, to quantify the model confidence during inference. Quantified uncertainty helps experts select the best instances to label for further training. Our uncertainty-aware labeling reaches the SOTA with significantly fewer annotations compared to random labeling. Last, we demonstrate how our pretrained encoders can surpass current SOTA for wholeslide image classification with weak supervision. Our work lays the foundation for data and task-agnostic pretrained deep networks with quantified uncertainty.

SATHUR: Self Augmenting Task Hallucinal Unified Representation for Generalized Class Incremental Learning

Sathursan Kanagarajah, Thanuja Ambegoda, Ranga Rodrigo

Conference ICCV 2023 IEEE/CVF International Conference on Computer Vision Workshops (ICCVW) , pp. 3465-3472 · 2023 · Cited by 0

Computer VisionMachine Learning and Pattern Recognition

Abstract

Class Incremental Learning (CIL) is inspired by the human ability to learn new classes without forgetting previous ones. CIL becomes more challenging in real-world scenarios when the samples in each incremental step are imbalanced. This creates another branch of problem, called Generalized Class Incremental Learning (GCIL) where each incremental step is structured more realistically. Grow When Required (GWR) network, a type of Self-Organizing Map (SOM), dynamically creates and removes nodes and edges for adaptive learning. GWR performs incremental learning from feature vectors extracted by a Convolutional Neural Network (CNN), which acts as a feature extractor. The inherent ability of GWR to form distinct clusters, each corresponding to a class in the feature vector space, regardless of the order of samples or class imbalances, is well suited to achieving GCIL. To enhance GWR's classification …

KORSAL: Key-Point Based Online Real-Time Spatio-Temporal Action Localization

Kalana G Abeywardena, Shechem Sumanthiran, Sakuna Jayasundara, Sachira Karunasena, Ranga Rodrigo, Peshala Jayasekara

Conference CCECE 2023 IEEE Canadian Conference on Electrical and Computer Engineering (CCECE) , pp. 279-284 · 2023 · Cited by 0

Computer VisionMachine Learning and Pattern Recognition

Abstract

Real-time and online action localization in videos poses a critical and formidable challenge. Achieving accurate action localization necessitates the integration of both temporal and spatial information. However, existing approaches rely on computationally intensive 3D convolutional neural network (CNN) architectures or redundant two-stream architectures with optical flow, rendering them unsuitable for real-time, online applications. To address this, we propose a novel approach that leverages fast and efficient key-point-based bounding box prediction for spatial action localization. Additionally, we introduce a tube-linking algorithm that ensures the temporal continuity of action tubes even in the presence of occlusions. By combining temporal and spatial information into a cascaded input for a single network, we eliminate the need for a two-stream architecture, enabling the network to effectively learn from both types …

Vision-Based Incoming Traffic Estimator Using Deep Neural Network on General Purpose Embedded Hardware

KG Zoysa, Sudath Rohan Munasinghe

Preprint arXiv arXiv preprint arXiv:2311.16125 · 2023 · Cited by 0

Computer VisionMachine Learning and Pattern RecognitionIntelligent Transportation SystemsEmbedded Systems and Computer Architecture

Abstract

Traffic management is a serious problem in many cities around the world. Even the suburban areas are now experiencing regular traffic congestion. Inappropriate traffic control wastes fuel, time, and the productivity of nations. Though traffic signals are used to improve traffic flow, they often cause problems due to inappropriate or obsolete timing that does not tally with the actual traffic intensity at the intersection. Traffic intensity determination based on statistical methods only gives the average intensity expected at any given time. However, to control traffic accurately, it is required to know the real-time traffic intensity. In this research, image processing and machine learning have been used to estimate actual traffic intensity in real time. General-purpose electronic hardware has been used for in-situ image processing based on the edge-detection method. A deep neural network (DNN) was trained to infer traffic intensity in each image in real time. The trained DNN estimated traffic intensity accurately in 90% of the real-time images during road tests. The electronic system was implemented on a Raspberry Pi single-board computer; hence, it is cost-effective for large-scale deployment.

The Achilles Heel of Artificial Intelligence

Upeka Premaratne, Saman Halgamuge

Conference Asian Conference on Intelligent Information and Database Systems , pp. 387-398 · 2023 · Cited by 0

Machine Learning and Pattern Recognition

Abstract

Since the dawn of its development the computer has been a staple of science fiction and thus mostly due to it humanity has constantly dreaded a day when intelligence stemming from computers commonly known as Artificial Intelligence (AI) would allegedly take over the world. The recent advent of advanced AI chatbot technology has again sparked that fear due to its ability to compose essays similar to that of a human being. This chapter discusses the concept of intelligence in biology and binary digital computing. Based upon the weaknesses of either, especially the hidden vulnerabilities of AI predicted by Gödel’s First Incompleteness Theorem and role of humans in programming AI, the question of whether it is likely to happen in the near future is discussed.

Digital IC Functionality Duplication using Neural Networks

Anjana Bandara, Sahan Nayanajith, Ayesh Rajakaruna, Supun Chirantha, Subramaniam Thayaparan

Conference ICIIS 2023 IEEE 17th International Conference on Industrial and Information Systems (ICIIS) , pp. 453-458 · 2023 · Cited by 0

Machine Learning and Pattern RecognitionDigital Electronic Systems

Abstract

In this paper, we propose a method for duplicating digital circuits using neural networks (NNs). Our approach involves training a common neural network model on the inputs and outputs of existing digital circuits, creating a digital twin. This digital twin can be used to predict the outputs of a digital I'C, only using its inputs and this has been verified using counter circuits, and shift register circuits. Moreover, we have successfully validated the functionality duplication of digital logic in a robotic arm equipped with servo motors, further validating the utility of our approach.

MOSAIC: Masked Optimisation with Selective Attention for Image Reconstruction

Pamuditha Somarathne, Tharindu Wickremasinghe, Amashi Niwarthana, Arulmolivarman Thieshanthan, Chamira U. S. Edussooriya, Dushan N Wadduwage

Preprint arXiv arXiv preprint arXiv:2306.00906 · 2023 · Cited by 0

Computer VisionMachine Learning and Pattern RecognitionBiomedical Imaging and Reconstruction

Abstract

Compressive sensing (CS) reconstructs images from sub-Nyquist measurements by solving a sparsity-regularized inverse problem. Traditional CS solvers use iterative optimizers with hand crafted sparsifiers, while early data-driven methods directly learn an inverse mapping from the low-dimensional measurement space to the original image space. The latter outperforms the former, but is restrictive to a pre-defined measurement domain. More recent, deep unrolling methods combine traditional proximal gradient methods and data-driven approaches to iteratively refine an image approximation. To achieve higher accuracy, it has also been suggested to learn both the sampling matrix, and the choice of measurement vectors adaptively. Contrary to the current trend, in this work we hypothesize that a general inverse mapping from a random set of compressed measurements to the image domain exists for a given measurement basis, and can be learned. Such a model is single-shot, non-restrictive and does not parametrize the sampling process. To this end, we propose MOSAIC, a novel compressive sensing framework to reconstruct images given any random selection of measurements, sampled using a fixed basis. Motivated by the uneven distribution of information across measurements, MOSAIC incorporates an embedding technique to efficiently apply attention mechanisms on an encoded sequence of measurements, while dispensing the need to use unrolled deep networks. A range of experiments validate our proposed architecture as a promising alternative for existing CS reconstruction methods, by achieving the state-of-the-art for metrics of …

From hours to seconds: towards 100x faster quantitative phase imaging via differentiable microscopy (Conference Presentation)

Udith Haputhanthri, Kithmini Herath, Ramith Hettiarachchi, Hasindu Kariyawasam, Alaa Alameer Ahmad, Balpreet Singh Ahluwalia, Chamira U. S. Edussooriya, Dushan N Wadduwage

Conference Quantitative Phase Imaging IX , pp. PC1238909 · 2023 · Cited by 0

Machine Learning and Pattern RecognitionBiomedical Imaging and ReconstructionPhotonics and Optical Systems

Abstract

With applications ranging from metabolomics to histopathology, quantitative phase microscopy (QPM) is a powerful label-free imaging modality. However, the speed of current QPM systems is limited by electronic hardware. To improve throughput further, here we propose differentiable optical-electronic quantitative phase microscopy (∂μ) that acquires images in a compressed form such that more information can be transferred beyond the electronic hardware bottleneck. The proposed microscopy uses optical feature extractors as image compressors. The resultant intensity distribution is then decompressed into QPM images by a reconstruction network. By optimizing optical-electronic parameters in an end-to-end manner, our method can improve the QPI throughput from Hours to Seconds (more than an order of magnitude).

Crosspoint: Self-supervised cross-modal contrastive learning for 3d point cloud understanding

Mohamed Afham, Isuru Dissanayake, Dinithi Dissanayake, Amaya Dharmasiri, Kanchana Thilakarathna, Ranga Rodrigo

Conference CVPR 2022 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) , pp. 9892-9902 · 2022 · Cited by 521

Computer VisionMachine Learning and Pattern Recognition

Abstract

Manual annotation of large-scale point cloud dataset for varying tasks such as 3D object classification, segmentation and detection is often laborious owing to the irregular structure of point clouds. Self-supervised learning, which operates without any human labeling, is a promising approach to address this issue. We observe in the real world that humans are capable of mapping the visual concepts learnt from 2D images to understand the 3D world. Encouraged by this insight, we propose CrossPoint, a simple cross-modal contrastive learning approach to learn transferable 3D point cloud representations. It enables a 3D-2D correspondence of objects by maximizing agreement between point clouds and the corresponding rendered 2D image in the invariant space, while encouraging invariance to transformations in the point cloud modality. Our joint training objective combines the feature correspondences within and …

Towards accurate cross-domain in-bed human pose estimation

Mohamed Afham, Udith Haputhanthri, Jathurshan Pradeepkumar, Mithunjha Anandakumar, Anjula C. De Silva, Chamira U. S. Edussooriya

Conference ICASSP ICASSP 2022-2022 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP) , pp. 2664-2668 · 2022 · Cited by 18

Computer VisionMachine Learning and Pattern RecognitionPhysiological Monitoring and Digital Health

Abstract

Human behavioral monitoring during sleep is essential for various medical applications. Majority of the contactless human pose estimation algorithms are based on RGB modality, causing ineffectiveness in in-bed pose estimation due to occlusions by blankets and varying illumination conditions. Long-wavelength infrared (LWIR) modality based pose estimation algorithms overcome the aforementioned challenges; however, ground truth pose generations by a human annotator under such conditions are not feasible. A feasible solution to address this issue is to transfer the knowledge learned from images with pose labels and no occlusions, and adapt it towards real world conditions (occlusions due to blankets). In this paper, we propose a novel learning strategy comprises of two-fold data augmentation to reduce the cross-domain discrepancy and knowledge distillation to learn the distribution of unlabeled images in …

Vision transformer with convolutional encoder–decoder for hand gesture recognition using 24-GHz Doppler radar

Kavinda Kehelella, Gayangana Leelarathne, Dhanuka Marasinghe, Nisal Kariyawasam, Viduneth Ariyarathna, Arjuna Madanayake, Ranga Rodrigo, Chamira U. S. Edussooriya

Journal IEEE Sensors Letters , vol. 6(10) , pp. 1-4 · 2022 · Cited by 12

Machine Learning and Pattern RecognitionDigital Signal ProcessingArray and Radar Signal Processing

Abstract

Transformers combined with convolutional encoders have been recently used for hand gesture recognition (HGR) using micro-Doppler signatures. In this letter, we propose a vision-transformer-based architecture for HGR with multiantenna continuous-wave Doppler radar receivers. The proposed architecture consists of three modules: 1) a convolutional encoder–decoder, 2) an attention module with three transformer layers, and 3) a multilayer perceptron. The novel convolutional decoder helps to feed patches with larger sizes to the attention module for improved feature extraction. Experimental results obtained with a dataset corresponding to a two-antenna continuous-wave Doppler radar receiver operating at 24 GHz (published by Skaria et al.) confirm that the proposed architecture achieves an accuracy of 98.3% which substantially surpasses the state-of-the-art on the used dataset.

Visual-semantic contrastive alignment for few-shot image classification

Mohamed Afham, Ranga Rodrigo

Preprint arXiv arXiv preprint arXiv:2210.11000 · 2022 · Cited by 11

Computer VisionMachine Learning and Pattern RecognitionVision-Language and Multimodal AI

Abstract

Few-Shot learning aims to train and optimize a model that can adapt to unseen visual classes with only a few labeled examples. The existing few-shot learning (FSL) methods, heavily rely only on visual data, thus fail to capture the semantic attributes to learn a more generalized version of the visual concept from very few examples. However, it is a known fact that human visual learning benefits immensely from inputs from multiple modalities such as vision, language, and audio. Inspired by the human learning nature of encapsulating the existing knowledge of a visual category which is in the form of language, we introduce a contrastive alignment mechanism for visual and semantic feature vectors to learn much more generalized visual concepts for few-shot learning. Our method simply adds an auxiliary contrastive learning objective which captures the contextual knowledge of a visual category from a strong textual encoder in addition to the existing training mechanism. Hence, the approach is more generalized and can be plugged into any existing FSL method. The pre-trained semantic feature extractor (learned from a large-scale text corpora) we use in our approach provides a strong contextual prior knowledge to assist FSL. The experimental results done in popular FSL datasets show that our approach is generic in nature and provides a strong boost to the existing FSL baselines.

Neural mixture models with expectation-maximization for end-to-end deep clustering

Dumindu Tissera, Kasun Vithanage, Rukshan Darshana Wijesinghe, Alex Xavier, Sanath Jayasena, Shantha Fernando, Ranga Rodrigo

Journal Neurocomputing , vol. 505 , pp. 249-262 · 2022 · Cited by 10

Machine Learning and Pattern Recognition

Abstract

Any clustering algorithm must synchronously learn to model the clusters and allocate data to those clusters in the absence of labels. Mixture model-based methods model clusters with pre-defined statistical distributions and allocate data to those clusters based on the cluster likelihoods. They iteratively refine those distribution parameters and member assignments following the Expectation-Maximization (EM) algorithm. However, the cluster representability of such hand-designed distributions that employ a limited amount of parameters is not adequate for most real-world clustering tasks. In this paper, we realize mixture model-based clustering with a neural network where the final layer neurons, with the aid of an additional transformation, approximate cluster distribution outputs. The network parameters pose as the parameters of those distributions. The result is an elegant, much-generalized representation of clusters …

Differentiable microscopy designs an all optical quantitative phase microscope

Kithmini Herath, Udith Haputhanthri, Ramith Hettiarachchi, Hasindu Kariyawasam, Alaa Alameer Ahmad, Balpreet Singh Ahluwalia, Chamira U. S. Edussooriya, Dushan N Wadduwage

Other · 2022 · Cited by 8

Machine Learning and Pattern RecognitionBiomedical Imaging and ReconstructionPhotonics and Optical Systems

Abstract

Ever since the first microscope by Zacharias Janssen in the late 16th century, scientists have been inventing new types of microscopes for various tasks. Inventing a novel architecture demands years, if not decades, worth of scientific experience and creativity. In this work, we introduce Differentiable Microscopy (∂ µ), a deep learning-based design paradigm, to aid scientists design new interpretable microscope architectures. Differentiable microscopy first models a common physics-based optical system however with trainable optical elements at key locations on the optical path. Using pre-acquired data, we then train the model end-to-end for a task of interest. The learnt design proposal can then be simplified by interpreting the learnt optical elements. As a first demonstration, based on the optical 4-f system, we present an all-optical quantitative phase microscope (QPM) design that requires no computational post-reconstruction. A follow-up literature survey suggested that the learnt architecture is similar to the generalized phase concept developed two decades ago. We then incorporate the generalized phase contrast concept to simplify the learning procedure. Furthermore, we also demonstrate that similar results can be achieved by an uninterpretable learning based method, namely diffractive deep neural networks (D2NN). We outperform the existing benchmark for all-optical phase-to-intensity conversion on multiple datasets, and ours is the first demonstration of its kind on D2NNs. The proposed differentiable microscopy framework supplements the creative process of designing new optical systems and would perhaps lead to unconventional …

HPGNN: Using Hierarchical Graph Neural Networks for Outdoor Point Cloud Processing

Arulmolivarman Thieshanthan, Amashi Niwarthana, Pamuditha Somarathne, Tharindu Wickremasinghe, Ranga Rodrigo

Conference ICPR International Conference on Pattern Recognition (ICPR) , pp. 2700-2706 · 2022 · Cited by 5

Computer VisionMachine Learning and Pattern Recognition

Abstract

Inspired by recent improvements in point cloud processing for autonomous navigation, we focus on using hierarchical graph neural networks for processing and feature learning over large-scale outdoor LiDAR point clouds. We observe that existing GNN based methods fail to overcome challenges of scale and irregularity of points in outdoor datasets. Addressing the need to preserve structural details while learning over a larger volume efficiently, we propose Hierarchical Point Graph Neural Network (HPGNN). It learns node features at various levels of graph coarseness to extract information. This enables to learn over a large point cloud while retaining fine details that existing pointlevel graph networks struggle to achieve. Connections between multiple levels enable a point to learn features in multiple scales, in a few iterations. We design HPGNN as a purely GNN-based approach, so that it offers modular …

Class-aware attention for multimodal trajectory prediction

Bimsara Pathiraja, Sudath Rohan Munasinghe, Malshan Ranawella, Maleesha De Silva, Ranga Rodrigo, Peshala Jayasekara

Preprint arXiv arXiv preprint arXiv:2209.00062 · 2022 · Cited by 3

Machine Learning and Pattern RecognitionAutonomous Systems and Intelligent ControlIntelligent Transportation Systems

Abstract

Predicting the possible future trajectories of the surrounding dynamic agents is an essential requirement in autonomous driving. These trajectories mainly depend on the surrounding static environment, as well as the past movements of those dynamic agents. Furthermore, the multimodal nature of agent intentions makes the trajectory prediction problem more challenging. All of the existing models consider the target agent as well as the surrounding agents similarly, without considering the variation of physical properties. In this paper, we present a novel deep-learning based framework for multimodal trajectory prediction in autonomous driving, which considers the physical properties of the target and surrounding vehicles such as the object class and their physical dimensions through a weighted attention module, that improves the accuracy of the predictions. Our model has achieved the highest results in the nuScenes trajectory prediction benchmark, out of the models which use rasterized maps to input environment information. Furthermore, our model is able to run in real-time, achieving a high inference rate of over 300 FPS.

Differentiable microscopy designs an all optical phase retrieval microscope

Kithmini Herath, Hasindu Kariyawasam, Ramith Hettiarachchi, Udith Haputhanthri, Dushantha Nalin K Jayakody, Raja N Ahmad, Alaa Alameer Ahmad, Balpreet Singh Ahluwalia, Chamira U. S. Edussooriya, Dushan N Wadduwage

Preprint arXiv arXiv preprint arXiv:2203.14944 · 2022 · Cited by 3

Machine Learning and Pattern RecognitionBiomedical Imaging and ReconstructionPhotonics and Optical Systems

Abstract

Designing new optical systems from the ground up for microscopy imaging tasks such as phase retrieval, requires substantial scientific expertise and creativity. To augment the traditional design process, we propose differentiable microscopy ( ), which introduces a top-down design approach. Using all optical phase retrieval as an illustrative example, we demonstrate the effectiveness of data-driven microscopy design through . Furthermore, we conduct comprehensive comparisons with existing all-optical phase retrieval methods, showcasing the consistent superiority of our learned designs across multiple datasets, including biological samples. To substantiate our ideas, we experimentally validate the functionality of one of the learned designs, providing a proof of concept. The proposed differentiable microscopy framework supplements the creative process of designing new phase microscopy systems and may be extended to other similar applications in optical design.

Dynamic template initialization for part-aware person re-ID

Kalana G Abeywardena, Shechem Sumanthiran, Sanoojan Baliah, Nadarasar Bahavan, Nalith Udugampola, Ajith Pasqual, Chamira U. S. Edussooriya, Ranga Rodrigo

Preprint arXiv arXiv preprint arXiv:2208.11440 · 2022 · Cited by 2

Computer VisionMachine Learning and Pattern Recognition

Abstract

Many of the existing Person Re-identification (Re-ID) approaches depend on feature maps which are either partitioned to localize parts of a person or reduced to create a global representation. While part localization has shown significant success, it uses either na{\i}ve position-based partitions or static feature templates. These, however, hypothesize the pre-existence of the parts in a given image or their positions, ignoring the input image-specific information which limits their usability in challenging scenarios such as Re-ID with partial occlusions and partial probe images. In this paper, we introduce a spatial attention-based Dynamic Part Template Initialization module that dynamically generates part-templates using mid-level semantic features at the earlier layers of the backbone. Following a self-attention layer, human part-level features of the backbone are used to extract the templates of diverse human body parts using a simplified cross-attention scheme which will then be used to identify and collate representations of various human parts from semantically rich features, increasing the discriminative ability of the entire model. We further explore adaptive weighting of part descriptors to quantify the absence or occlusion of local attributes and suppress the contribution of the corresponding part descriptors to the matching criteria. Extensive experiments on holistic, occluded, and partial Re-ID task benchmarks demonstrate that our proposed architecture is able to achieve competitive performance. Codes will be included in the supplementary material and will be made publicly available.

From Hours to Seconds: Towards 100x Faster Quantitative Phase Imaging via Differentiable Microscopy

Udith Haputhanthri, Kithmini Herath, Ramith Hettiarachchi, Hasindu Kariyawasam, Alaa Alameer Ahmad, Balpreet Singh Ahluwalia, Chamira U. S. Edussooriya, Dushan N Wadduwage

Preprint arXiv arXiv preprint arXiv:2205.11521 · 2022 · Cited by 1

Machine Learning and Pattern RecognitionBiomedical Imaging and ReconstructionPhotonics and Optical Systems

Abstract

With applications ranging from metabolomics to histopathology, quantitative phase microscopy (QPM) is a powerful label-free imaging modality. Despite significant advances in fast multiplexed imaging sensors and deep-learning-based inverse solvers, the throughput of QPM is currently limited by the speed of electronic hardware. Complementarily, to improve throughput further, here we propose to acquire images in a compressed form such that more information can be transferred beyond the existing electronic hardware bottleneck. To this end, we present a learnable optical compression-decompression framework that learns content-specific features. The proposed differentiable quantitative phase microscopy ( ) first uses learnable optical feature extractors as image compressors. The intensity representation produced by these networks is then captured by the imaging sensor. Finally, a reconstruction network running on electronic hardware decompresses the QPM images. In numerical experiments, the proposed system achieves compression of 64 while maintaining the SSIM of and PSNR of dB on cells. The results demonstrated by our experiments open up a new pathway for achieving end-to-end optimized (i.e., optics and electronic) compact QPM systems that may provide unprecedented throughput improvements.

A novel transfer learning-based approach for screening pre-existing heart diseases using synchronized ECG signals and heart sounds

Ramith Hettiarachchi, Udith Haputhanthri, Kithmini Herath, Hasindu Kariyawasam, Sudath Rohan Munasinghe, Kithmin Wickramasinghe, Duminda Samarasinghe, Anjula C. De Silva, Chamira U. S. Edussooriya

Conference ISCAS 2021 IEEE international symposium on circuits and systems (ISCAS) , pp. 1-5 · 2021 · Cited by 55

Machine Learning and Pattern RecognitionBiosignal ProcessingPhysiological Monitoring and Digital Health

Abstract

Diagnosing pre-existing heart diseases early in life is important as it helps prevent complications such as pulmonary hypertension, heart rhythm problems, blood clots, heart failure and sudden cardiac arrest. To identify such diseases, phonocardiogram (PCG) and electrocardiogram (ECG) waveforms convey important information. Therefore, effectively using these two modalities of data has the potential to improve the disease screening process. We evaluate this hypothesis on a subset of the PhysioNet Challenge 2016 Dataset which contains simultaneously acquired PCG and ECG recordings. Our novel dual-convolutional neural network based approach uses transfer learning to tackle the problem of having limited amounts of simultaneous PCG and ECG data that is publicly available, while having the potential to adapt to larger datasets. In addition, we introduce two main evaluation frameworks named record-wise …